scvi-tools

HERRY423/BioNexus

SkillLoads cleanly

Train official scvi-tools models (scVI/scANVI/totalVI/PeakVI/MultiVI/veloVI) on raw counts after the scRNA gold chain. Use for probabilistic batch integration…

Scores
out of 100 · grade B+

2026-08-20

Works

40% of the score

100/100

Loads cleanly: valid frontmatter, required fields present, no dangling references.

Maintained

25% of the score

100/100

no commits in the last 12 weeks
repo is less than two weeks old

Adopted

20% of the score

19/100

25 stars on the source repo.

Documented

15% of the score

75/100

328-word body.
Ships 23 bundled files.

Loads cleanly. Every structural check Claude Code needs to register this passed. Last commit today.

Install

npx skills add HERRY423/BioNexus/scvi-tools

What it says it does

Train official scvi-tools models (scVI/scANVI/totalVI/PeakVI/MultiVI/veloVI) on raw counts after the scRNA gold chain. Use for probabilistic batch integration or those named models. Does not run DestVI/Cell2location. Do not log-normalize before setup_anndata.

Every number above came out of reading the file and its repository. Nothing is a judgement call, nothing is a model’s opinion, and nothing can be paid for. The full method is published. Source last committed 2026-08-19.

Also in HERRY423/BioNexus

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Artifact	What the check found	Type	Reach	Last commit
single-cell-rna-qcHERRY423/BioNexus	clean	Skill	25 stars	today
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nextflow-developmentHERRY423/BioNexus	clean	Skill	25 stars	today
startHERRY423/BioNexus	clean	Skill	25 stars	today
spatial-transcriptomicsHERRY423/BioNexus	clean	Skill	25 stars	today

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