nextflow-development
HERRY423/BioNexusPrepare nf-core samplesheets, cluster nextflow.config, and write launch artifacts. nfcore_launch.py only wraps nf-core/rnaseq and nf-core/scrnaseq with…
Scores out of 100 · grade B+
2026-08-20Works
40% of the score100/100
- Loads cleanly: valid frontmatter, required fields present, no dangling references.
Maintained
25% of the score100/100
- no commits in the last 12 weeks
- repo is less than two weeks old
Adopted
20% of the score19/100
- 25 stars on the source repo.
Documented
15% of the score75/100
- 333-word body.
- Ships 27 bundled files.
Install
npx skills add HERRY423/BioNexus/nextflow-developmentWhat it says it does
Prepare nf-core samplesheets, cluster nextflow.config, and write launch artifacts. nfcore_launch.py only wraps nf-core/rnaseq and nf-core/scrnaseq with optional nextflow -preview. Other pipelines still use generate_samplesheet.py plus a hand-written nextflow run. Does not reimplement the pipelines.
Also in HERRY423/BioNexus
| Artifact | Score | What the check found | Type | Reach | Last commit |
|---|---|---|---|---|---|
| single-cell-rna-qcHERRY423/BioNexus | clean | Skill | 25 stars | today | |
| scientific-problem-selectionHERRY423/BioNexus | clean | Skill | 25 stars | today | |
| instrument-data-to-allotropeHERRY423/BioNexus | clean | Skill | 25 stars | today | |
| scvi-toolsHERRY423/BioNexus | clean | Skill | 25 stars | today | |
| startHERRY423/BioNexus | clean | Skill | 25 stars | today | |
| spatial-transcriptomicsHERRY423/BioNexus | clean | Skill | 25 stars | today |
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