cellxgene-context
ammawla/encode-toolkitGuide for integrating CellxGene Census single-cell data with ENCODE bulk experiments. Use when users need cell-type-specific expression context for ENCODE…
Scores out of 100 · grade B+
2026-08-14Works
40% of the score100/100
- Loads cleanly: valid frontmatter, required fields present, no dangling references.
Maintained
25% of the score92/100
- no commits in the last 12 weeks
Adopted
20% of the score20/100
- 26 stars on the source repo.
Documented
15% of the score90/100
- 2,429 words with worked examples.
- Ships 1 bundled file.
Install
npx skills add ammawla/encode-toolkit/cellxgene-contextWhat it says it does
Guide for integrating CellxGene Census single-cell data with ENCODE bulk experiments. Use when users need cell-type-specific expression context for ENCODE regulatory data, want to deconvolve bulk ENCODE signals, or validate regulatory elements at single-cell resolution. Trigger on: CellxGene, single-cell atlas, cell type expression, Census, cell type specificity, single-cell context, scRNA-seq atlas.
Also in ammawla/encode-toolkit
| Artifact | Score | What the check found | Type | Reach | Last commit |
|---|---|---|---|---|---|
| accessibility-aggregationammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago | |
| bioinformatics-installerammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago | |
| histone-aggregationammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago | |
| methylation-aggregationammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago | |
| batch-analysisammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago | |
| cite-encodeammawla/encode-toolkit | clean | Skill | 26 stars | 19 days ago |
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